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  • Tutorial: ODE vs. SSA

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  • gillespy2 package

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All modules for which code is available

  • collections
  • datetime
  • gillespy2.core.assignmentrule
  • gillespy2.core.cleanup
  • gillespy2.core.events
  • gillespy2.core.functiondefinition
  • gillespy2.core.gillespyError
  • gillespy2.core.gillespySolver
  • gillespy2.core.jsonify
  • gillespy2.core.liveGraphing
  • gillespy2.core.model
  • gillespy2.core.parameter
  • gillespy2.core.raterule
  • gillespy2.core.reaction
  • gillespy2.core.results
  • gillespy2.core.sortableobject
  • gillespy2.core.species
  • gillespy2.core.timespan
  • gillespy2.solvers.cpp.build.build_engine
  • gillespy2.solvers.cpp.build.expression
  • gillespy2.solvers.cpp.build.make
  • gillespy2.solvers.cpp.build.template_gen
  • gillespy2.solvers.cpp.c_decoder
  • gillespy2.solvers.cpp.c_solver
  • gillespy2.solvers.cpp.ode_c_solver
  • gillespy2.solvers.cpp.ssa_c_solver
  • gillespy2.solvers.cpp.tau_hybrid_c_solver
  • gillespy2.solvers.cpp.tau_leaping_c_solver
  • gillespy2.solvers.numpy.CLE_solver
  • gillespy2.solvers.numpy.ode_solver
  • gillespy2.solvers.numpy.ssa_solver
  • gillespy2.solvers.numpy.tau_hybrid_solver
  • gillespy2.solvers.numpy.tau_leaping_solver
  • gillespy2.solvers.utilities.Tau
  • gillespy2.solvers.utilities.cpp_support_test
  • gillespy2.solvers.utilities.solverutils
  • gillespy2.stochss.StochSSexport
 
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