StochSS-Compute 1.0.0

StochSS-Compute is a compute delegation server for the StochSS family of stochastic simulation software. StochSS-Compute allows for one to run StochSS or GillesPy2 simulations on distributed cloud compute resources.

Getting a copy of GillesPy2

The latest version of GillesPy2 can be found on PyPI. The source code is available on GitHub. GillesPy2 is licensed under the GNU General Public License version 3.

Please register as a user! GillesPy2's development is funded by NIH grant 2R01EB014877, and to continue support, we need to prove GillesPy2 has users. Please fill out our short registration form!

PLEASE REGISTER AS A USER, so that we can prove StochSS-Compute has many users when we seek funding to support development. StochSS-Compute is part of the StochSS project.

Getting help

If you find any problem with StochSS-Compute or this documentation, please report it using the GitHub issue tracker for the project. You can also contact the main author, Matthew Dippel, directly with questions and suggestions.

Documentation

Getting started

• Installation
  • Preferred method: using PyPI
  • Alternative methods: using the code repository
• Docker
  • Server
• Basic Usage
  • Client
  • Server

Tutorials

• Tutorial Docker Container
• StochSS-Compute on AWS
  • AWS Configuration

API reference

• stochss_compute package
  • Subpackages
    • stochss_compute.client package
    • stochss_compute.cloud package
    • stochss_compute.core package
    • stochss_compute.server package
  • Submodules
  • stochss_compute.launch module
    • launch_server()
    • launch_with_cluster()
  • Module contents

Indices and tables

• Index

• Module Index

• Search Page